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!!Vibration

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Vibration

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!!Vibration

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!!Vibration

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(:right !!Vibration :)

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!!Vibration

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(:right !!Vibration :)

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Vibration

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!!Vibration

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!!Trajectory

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Trajectory

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Trajectory

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!!Trajectory

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Animation Settings

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(:title Animation Settings:)

March 09, 2009, at 05:56 PM by 148.187.130.153 -

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http://bioinformatics.org/molekel/uploads/ReferenceGuide/animation_preferences_dlg.png

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It is not possible to change the Animation Mode while an animation is in progress.

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Frequency Table - Shows the vibration modes read from file; the current vibration mode can be changed by clicking on the corresponding row.

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Frequency Table - Shows the vibration modes read from file. Any number of animation modes can be combined by checking multiple checkboxes.

February 02, 2007, at 11:39 AM by Ugo Varetto -

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Swing: Animation will play from first to last frame then play backward from last but one to first frame until stopped by the user.

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Swing: Animation will play from first to last frame then play backward from last but one to first frame until stopped by the user.

Step - Changes number of frames per animation step.

December 21, 2006, at 11:21 AM by Ugo Varetto -

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Update in progress

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Per-molecule animation settings are used to change the behavior/appearance of the selected molecule.

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Per-molecule animation settings are used to change the dynamic behavior/appearance of the selected molecule.

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Animation Mode - Select animation mode between Trajectory and Vibration.

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Animation Mode - Choose animation mode between Trajectory and Vibration.

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December 20, 2006, at 06:34 PM by Ugo Varetto -

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Animation settings are changed through the Animation-Per-Molecule Settings menu which opens the Animation Preferences dialog.

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Swing:

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Swing: Animation will play from first to last frame then play backward from last but one to first frame until stopped by the user.

December 20, 2006, at 06:16 PM by Ugo Varetto -

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December 20, 2006, at 06:15 PM by Ugo Varetto -

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The UI controls on the dialog are enabled if and only if the molecule can be animated i.e. if vibration or trajectory information is available.

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Animation - On/Off - Enable/Disable animation for the selected molecule.

Animation Mode - Select animation mode between Trajectory and Vibration.

Time step - Set the animation time step in milliseconds for this molecule.

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Scaling factor - Frequency multiplier, vibration speed is multiplied by this value.

Show arrows - Hide/Show arrows. Arrows are used to display the direction of motion and speed of individual atoms.

Constant arrow length - If checked all the arrows have constant length; enabled only when Show arrows checked.

Arrow scaling - Arrow length scaling factor; enabled only when Show arrows checked.

Frequency Table - Shows the vibration modes read from file; the current vibration mode can be changed by clicking on the corresponding row.

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Trajectory

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%rfloat http://bioinformatics.org/molekel/uploads/ReferenceGuide/animation_trajectory_dlg.png

Trajectory

Direction - Forward/Backward - Change the direction of motion.

Loop Mode - Changes the way animation is repeated.

One Time: Play animation once; molecule will stop animating after the last frame has been reached.
Loop: Animation will go from first to last frame and then restart from first frame until stopped by the user.
Swing:

December 20, 2006, at 05:29 PM by Ugo Varetto -

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December 20, 2006, at 05:28 PM by Ugo Varetto -

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December 20, 2006, at 05:25 PM by Ugo Varetto -

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Per-molecule animation settings are used to change the behavior/appearance of the selected molecule. dsfda fdafdas

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Per-molecule animation settings are used to change the behavior/appearance of the selected molecule.

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Animation Settings

Per-molecule animation settings are used to change the behavior/appearance of the selected molecule.

Animation Settings

ReferenceGuide.Settings History

Vibration

Vibration

Trajectory

Trajectory

Animation Settings

Update in progress

Trajectory

Trajectory

Update in progress

Animation Settings

Animation

Vibration

Trajectory